Package index • TDMM

Fit and control

tdmm(): Fit a Bayesian time-dynamic model with optional mixed effects
tdmm.control() tdmm_control(): Computational controls for TDMM fits
tdmm.priors(): Family-specific default TDMM priors
tdmm.parallel(): Parallel TDMM fitting wrapper

Summaries, plots, and diagnostics

summary(<tdmm>): Summarize a fitted TDMM model
plot(<tdmm>): Plot TDMM coefficient functions
plot.trace(<tdmm>): Plot TDMM posterior traces
recover.tdmm.betas.ci(): Reconstruct TDMM coefficient-function intervals
make.tdmm.plot.grid(): Construct a TDMM plotting grid

Data checks

check.bernoulli.balance(): Check a binary Bernoulli response.
check.gaussian.response(): Check a numeric Gaussian response.
check.poisson.counts(): Check a nonnegative integer Poisson response.
check.tdmm.data.structure(): Check TDMM input data structure
check.tdmm.family.data(): Check TDMM data for an outcome family
check.tdmm.subject.balance(): Inspect observations per subject

Simulation helpers

data.gen.tdmm.bern(): Generate Bernoulli TDMM simulation data
data.gen.tdmm.gauss(): Generate a Gaussian TDMM simulation dataset
data.gen.tdmm.pois(): Generate Poisson TDMM simulation data